.agent/skills/nexus-code-review/SKILL.md

@@ -30,4 +30,14 @@ When conducting or receiving a code review for NexusReader, ensure the implement
 - [ ] **AI Prompts**: Ensure changes to AI logic do not bypass the `PromptRegistry` or token estimation limits defined in `AiSettings`.
 
 ## 6. Code Review Comments
-- [ ] **Specific Linking**: Comments should be linked to specific code. Try to avoid general comments about the entire pull request.
+
+### 6.1 Posting Comments
+- [ ] **Code-Linked Comments**: Every review comment **must** be anchored to a specific file and line range using the Gitea inline comment API (`path` + `new_line_num`/`old_line_num`). Free-floating general comments are only acceptable for summary notes that cannot be attributed to a single location.
+- [ ] **Severity Prefix**: Prefix each comment with its severity so the author can prioritize: `🔴 Blocking`, `🟡 Design/Architecture`, or `🟢 Minor/Suggestion`.
+- [ ] **Actionable Guidance**: Each comment must include a concrete, actionable suggestion — not just a description of the problem. Where applicable, provide a corrected code snippet.
+
+### 6.2 Resolving Comments (Author Responsibility)
+- [ ] **Reply Before Resolving**: When a review comment has been addressed, the author **must** reply to the specific thread explaining *how* the issue was resolved (e.g., commit SHA, approach taken, or a reasoned rejection with justification). Do not close a thread without a reply.
+- [ ] **Link to Fix**: If the resolution is a code change, include the commit SHA or a reference to the changed line in the reply (e.g., `Fixed in abc1234 — moved the guard before CTS allocation`).
+- [ ] **Close Only After Reply**: Mark a thread as **Resolved** only after posting the reply. A thread with no reply must remain open, even if the underlying code has changed.
+- [ ] **Rejection Must Be Justified**: If the author disagrees with a comment and chooses not to act on it, they must reply with a clear technical justification. The reviewer then decides whether to accept the reasoning and close the thread, or escalate it.

src/NexusReader.UI.Shared/Components/Organisms/BookIngestionModal.razor

@@ -27,14 +27,21 @@
             </div>
 
             <div class="modal-body">
-                <div class="parsing-state shimmer" style="@(IsParsing && !IsIndexing ? "display:flex;" : "display:none;")">
+                <div class="parsing-state shimmer" style="@(IsParsing ? "display:flex;" : "display:none;")">
                     <div class="shimmer-content">
                         <div class="spinner"></div>
                         <p>Scanning metadata...</p>
                     </div>
                 </div>
 
-                <div class="verification-state" style="@(IsVerifying && !IsParsing && !IsIndexing ? "display:flex;" : "display:none;")">
+                <div class="ingesting-state shimmer" style="@(IsIngesting ? "display:flex;" : "display:none;")">
+                    <div class="shimmer-content">
+                        <div class="spinner"></div>
+                        <p>Saving book to library...</p>
+                    </div>
+                </div>
+                
+                <div class="verification-state" style="@(IsVerifying ? "display:flex;" : "display:none;")">
                     @if (Metadata != null)
                     {
                         <div class="verification-layout">
@@ -70,8 +77,8 @@
                         <div class="actions">
                             <NexusButton Class="btn-secondary" OnClick="Reset" Disabled="IsIngesting">Back</NexusButton>
                             <NexusButton Class="@($"btn-primary {(IsIngesting ? "btn-loading" : "")}")" 
-                                         OnClick="SaveToLibrary" 
+                                          OnClick="SaveToLibrary" 
-                                         Disabled="IsIngesting">
+                                          Disabled="IsIngesting">
                                 @(IsIngesting ? "" : "Save to Library")
                             </NexusButton>
                         </div>
@@ -79,9 +86,9 @@
                 </div>
                 
                 <div class="upload-state @(_isDragging ? "drag-over" : "")" 
-                     style="@(!IsParsing && !IsVerifying && !IsIndexing ? "display:flex;" : "display:none;")"
+                      style="@(IsUploadActive ? "display:flex;" : "display:none;")"
-                     @ondragenter="OnDragEnter" 
+                      @ondragenter="OnDragEnter" 
-                     @ondragleave="OnDragLeave">
+                      @ondragleave="OnDragLeave">
                     <div class="drop-zone">
                         <InputFile id="epub-upload" OnChange="HandleFileSelected" accept=".epub" class="file-input-cover" />
                         <div class="drop-zone-content">
@@ -143,6 +150,7 @@
     private string? ErrorMessage { get; set; }
     private byte[]? _epubBytes;
     private bool _disposed;
+    private bool IsUploadActive => !IsParsing && !IsVerifying && !IsIngesting && !IsIndexing;
     
     // Allow up to 50 MB
     private const long MaxFileSize = 50 * 1024 * 1024;
@@ -163,6 +171,8 @@
         
         if (!_disposed)
         {
+            // Dispatch the state change to the Blazor synchronization context
+            // because this event is triggered asynchronously from a SignalR / WebSocket background thread.
             await InvokeAsync(StateHasChanged);
         }
 
@@ -177,6 +187,8 @@
             if (IngestedBookId != Guid.Empty)
             {
                 var bookId = IngestedBookId;
+                // Dispatch UI updates and navigation back to the Blazor thread
+                // to avoid thread affinity issues and potential UI lockups in MAUI/Web applications.
                 await InvokeAsync(async () => {
                     if (_disposed) return;
                     await CloseModal();

src/NexusReader.UI.Shared/Components/Organisms/BookIngestionModal.razor.css

@@ -118,8 +118,9 @@
     z-index: 10;
 }
 
-/* Parsing State */
+/* Parsing and Ingesting States */
-.parsing-state {
+.parsing-state,
+.ingesting-state {
     flex: 1;
     display: flex;
     justify-content: center;
@@ -158,7 +159,8 @@
     filter: drop-shadow(0 0 8px rgba(0, 255, 153, 0.3));
 }
 
-.parsing-state p {
+.parsing-state p,
+.ingesting-state p {
     color: var(--nexus-text);
     font-family: var(--nexus-font-mono, monospace);
     font-size: 0.9rem;
@@ -371,10 +373,11 @@
     position: absolute;
     width: 20px;
     height: 20px;
-    border: 2px solid rgba(0, 0, 0, 0.1);
+    border: 2px solid rgba(255, 255, 255, 0.2);
-    border-top-color: #000;
+    border-top-color: var(--nexus-neon, #00ffaa);
     border-radius: 50%;
     animation: spin 0.8s linear infinite;
+    filter: drop-shadow(0 0 4px var(--nexus-neon, #00ffaa));
 }
 
 /* Indexing State */

src/NexusReader.UI.Shared/Components/Organisms/ReaderCanvas.razor

@@ -159,15 +159,24 @@
         }
     }
 
+    private async ValueTask<IJSObjectReference> EnsureViewportModuleAsync()
+    {
+        if (_viewportModule == null)
+        {
+            _viewportModule = await JS.InvokeAsync<IJSObjectReference>("import", "./_content/NexusReader.UI.Shared/js/viewport.js");
+        }
+        return _viewportModule;
+    }
+
     private async Task InitViewportDetectionAsync()
     {
         try
         {
-            _viewportModule = await JS.InvokeAsync<IJSObjectReference>("import", "./_content/NexusReader.UI.Shared/js/viewport.js");
+            var module = await EnsureViewportModuleAsync();
             _selfReference = DotNetObjectReference.Create(this);
-            var isMobileViewport = await _viewportModule.InvokeAsync<bool>("isMobileViewport");
+            var isMobileViewport = await module.InvokeAsync<bool>("isMobileViewport");
             await OnViewportChanged(isMobileViewport);
-            await _viewportModule.InvokeVoidAsync("registerViewportObserver", _selfReference);
+            await module.InvokeVoidAsync("registerViewportObserver", _selfReference);
         }
         catch (Exception ex)
         {
@@ -348,16 +357,25 @@
         _isLoadingChapter = false;
         StateHasChanged();
 
-        if (result.IsSuccess && !string.IsNullOrEmpty(NavigationService.PendingScrollBlockId))
+        if (result.IsSuccess)
         {
-            var targetBlockId = NavigationService.PendingScrollBlockId;
+            if (!string.IsNullOrEmpty(NavigationService.PendingScrollBlockId))
-            NavigationService.PendingScrollBlockId = null; // Clear it to prevent multiple scrolls
+            {
-            _currentActiveBlockId = targetBlockId;
+                var targetBlockId = NavigationService.PendingScrollBlockId;
+                NavigationService.PendingScrollBlockId = null; // Clear it to prevent multiple scrolls
+                _currentActiveBlockId = targetBlockId;
 
-            // Give the browser slightly more than one frame to render the loaded blocks
+                // Give the browser slightly more than one frame to render the loaded blocks
-            await Task.Delay(150);
+                await Task.Delay(150);
-            await ScrollToNodeAsync(targetBlockId);
+                await ScrollToNodeAsync(targetBlockId);
-            await InteractionService.RequestHighlightBlock(targetBlockId);
+                await InteractionService.RequestHighlightBlock(targetBlockId);
+            }
+            else
+            {
+                // Reset scroll to top now that the new content DOM is rendered
+                await Task.Delay(50); // Give the browser a frame to render the new chapter content
+                await ScrollToTopAsync();
+            }
         }
     }
 
@@ -365,7 +383,7 @@
     {
         try
         {
-            var module = _viewportModule ?? await JS.InvokeAsync<IJSObjectReference>("import", "./_content/NexusReader.UI.Shared/js/viewport.js");
+            var module = await EnsureViewportModuleAsync();
             await module.InvokeVoidAsync("scrollIntoView", id);
         }
         catch (Exception ex)
@@ -374,6 +392,19 @@
         }
     }
 
+    public async Task ScrollToTopAsync()
+    {
+        try
+        {
+            var module = await EnsureViewportModuleAsync();
+            await module.InvokeVoidAsync("scrollToTop", ".reader-canvas");
+        }
+        catch (Exception ex)
+        {
+            Logger.LogWarning(ex, "Failed to scroll reader canvas to top.");
+        }
+    }
+
     private Task HandleUpdate() => InvokeAsync(StateHasChanged);
 
     private void HandleEscape()

src/NexusReader.UI.Shared/Services/KnowledgeCoordinator.cs

@@ -8,7 +8,7 @@ using Microsoft.Extensions.Logging;
 
 namespace NexusReader.UI.Shared.Services;
 
-public sealed partial class KnowledgeCoordinator : IDisposable
+public sealed partial class KnowledgeCoordinator : IDisposable, IAsyncDisposable
 {
     private readonly IKnowledgeService _knowledgeService;
     private readonly IKnowledgeGraphService _graphService;
@@ -17,6 +17,9 @@ public sealed partial class KnowledgeCoordinator : IDisposable
     private readonly IReaderInteractionService _interactionService;
     private readonly ILogger<KnowledgeCoordinator> _logger;
 
+    private CancellationTokenSource? _graphCts;
+    private CancellationTokenSource? _quizCts;
+    
     public string CurrentFullPageContent { get; private set; } = string.Empty;
     
     /// <summary>
@@ -75,9 +78,38 @@ public sealed partial class KnowledgeCoordinator : IDisposable
         }
     }
 
+    private void CancelAndDisposeCts(ref CancellationTokenSource? cts)
+    {
+        var localCts = cts;
+        cts = null;
+        if (localCts != null)
+        {
+            try
+            {
+                localCts.Cancel();
+            }
+            catch (ObjectDisposedException) { }
+            finally
+            {
+                localCts.Dispose();
+            }
+        }
+    }
+
     public async Task ProcessFullPageAsync(string fullContent, string tenantId = "global", Guid? ebookId = null)
     {
-        if (string.IsNullOrWhiteSpace(fullContent)) return;
+        if (string.IsNullOrWhiteSpace(fullContent))
+        {
+            CancelAndDisposeCts(ref _graphCts);
+            await _graphService.Clear();
+            await _graphService.SetLoading(false);
+            CurrentFullPageContent = string.Empty;
+            return;
+        }
+
+        CancelAndDisposeCts(ref _graphCts);
+        _graphCts = new CancellationTokenSource();
+        var token = _graphCts.Token;
 
         CurrentFullPageContent = fullContent;
         LogGeneratingGraph(tenantId);
@@ -87,7 +119,9 @@ public sealed partial class KnowledgeCoordinator : IDisposable
         
         try
         {
-            var result = await _knowledgeService.GetGraphDataAsync(fullContent, tenantId, ebookId);
+            var result = await _knowledgeService.GetGraphDataAsync(fullContent, tenantId, ebookId, token);
+            token.ThrowIfCancellationRequested();
+
             if (result.IsSuccess)
             {
                 var packet = result.Value;
@@ -103,10 +137,17 @@ public sealed partial class KnowledgeCoordinator : IDisposable
             
             await _graphService.SetLoading(false);
         }
+        catch (OperationCanceledException)
+        {
+            _logger.LogInformation("[KnowledgeCoordinator] Graph generation task was canceled.");
+        }
         catch (Exception ex)
         {
-            await _graphService.SetLoading(false);
+            if (!token.IsCancellationRequested)
-            LogGraphError(ex, tenantId);
+            {
+                await _graphService.SetLoading(false);
+                LogGraphError(ex, tenantId);
+            }
         }
     }
 
@@ -118,11 +159,17 @@ public sealed partial class KnowledgeCoordinator : IDisposable
 
     public async Task<Result<KnowledgePacket>> RequestSummaryAndQuizAsync(string content, string tenantId = "global")
     {
+        CancelAndDisposeCts(ref _quizCts);
+        _quizCts = new CancellationTokenSource();
+        var token = _quizCts.Token;
+
         await _quizService.SetHydrating(true);
         LogRequestingSummary(tenantId);
         try
         {
-            var result = await _knowledgeService.GetSummaryAndQuizAsync(content, tenantId);
+            var result = await _knowledgeService.GetSummaryAndQuizAsync(content, tenantId, cancellationToken: token);
+            token.ThrowIfCancellationRequested();
+
             if (result.IsSuccess)
             {
                 var packet = result.Value;
@@ -138,10 +185,19 @@ public sealed partial class KnowledgeCoordinator : IDisposable
             LogSummaryWarning(tenantId);
             return Result.Fail(result.Errors);
         }
+        catch (OperationCanceledException)
+        {
+            _logger.LogInformation("[KnowledgeCoordinator] Quiz and summary generation task was canceled.");
+            return Result.Fail("Task canceled");
+        }
         catch (Exception ex)
         {
-            LogSummaryError(ex, tenantId);
+            if (!token.IsCancellationRequested)
-            return Result.Fail(new Error("Error requesting summary and quiz").CausedBy(ex));
+            {
+                LogSummaryError(ex, tenantId);
+                return Result.Fail(new Error("Error requesting summary and quiz").CausedBy(ex));
+            }
+            return Result.Fail("Task canceled");
         }
         finally
         {
@@ -151,6 +207,9 @@ public sealed partial class KnowledgeCoordinator : IDisposable
 
     public async Task ClearAsync()
     {
+        CancelAndDisposeCts(ref _graphCts);
+        CancelAndDisposeCts(ref _quizCts);
+
         CurrentFullPageContent = string.Empty;
         await _graphService.Clear();
         await _quizService.SetQuiz(null, null);
@@ -159,6 +218,27 @@ public sealed partial class KnowledgeCoordinator : IDisposable
     public void Dispose()
     {
         _interactionService.OnNodeSelected -= HandleNodeSelected;
+
+        CancelAndDisposeCts(ref _graphCts);
+        CancelAndDisposeCts(ref _quizCts);
+    }
+
+    public async ValueTask DisposeAsync()
+    {
+        _interactionService.OnNodeSelected -= HandleNodeSelected;
+
+        CancelAndDisposeCts(ref _graphCts);
+        CancelAndDisposeCts(ref _quizCts);
+
+        try
+        {
+            await _graphService.Clear();
+            await _quizService.SetQuiz(null, null);
+        }
+        catch (Exception ex)
+        {
+            _logger.LogWarning(ex, "Error clearing services during KnowledgeCoordinator disposal.");
+        }
     }
 
     [LoggerMessage(Level = LogLevel.Information, Message = "[KnowledgeCoordinator] Generating full page graph for tenant: {TenantId}")]

src/NexusReader.UI.Shared/wwwroot/js/viewport.js

@@ -38,3 +38,16 @@ export function scrollIntoView(id) {
     }
     return false;
 }
+
+// NOTE: Assumes the selector matches the active scroll container (default '.reader-canvas').
+// Scoping is flexible to avoid issues if SSR pre-render or animated layouts render multiple wrappers.
+export function scrollToTop(selector = '.reader-canvas') {
+    const el = document.querySelector(selector);
+    if (el) {
+        el.scrollTop = 0;
+        return true;
+    }
+    return false;
+}
+
+